Cross-group report
3 summarized samples · GRPs · 2026/9/30 09:50:40
Samples3
Events540,000
Populations2
QC reviewed0
Report composition
| Order | Section | Title | Caption |
|---|---|---|---|
| 1 | Gating hierarchy | Gating hierarchy | no |
| 2 | Population stats | Population stats | no |
| 3 | Multi-plot layout | Multi-plot layout | no |
| 4 | QC table | QC table | no |
| 5 | Workflow trail | Workflow trail | no |
| 6 | Text note | Methods note | yes |
Statistics scope
| Section | Statistic scope | Meaning |
|---|---|---|
| Cohort population summary | selected GRP samples | All summarized sample-level gate statistics pooled across the report scope. |
| Group comparison | selected GRPs | Always grouped by the user-selected GRP names, independent of the control comparison unit. |
| Control comparison | Metadata: condition | % Parent; control Control. |
| Prism export | Metadata: condition | Uses the same comparison setup as Control comparison; tables are 2 populations. |
| Appendix/details | sample rows within selected GRPs | Sample-level rows are audit detail and should reconcile to GRP summaries when the report is complete. |
Shared cross-group tile template
Shared cross-group tile template
Each selected group renders the same tile set in the same order so the report stays comparable.
Tile 1
Representative layout
Same multi-plot tile order for every selected group.
Tile 2
Population hierarchy
Shared gate and population identity across groups.
Tile 3
Population summary
Matched summary rows for %Parent, range, and CV.
Tile 4
Control comparison
Shared contrast tables and deltas across the same populations.
Tile 5
QC and provenance
Consistent QC, metadata, and workflow context per group.
Gating hierarchy
- All Eventsroot · 100.00%
Gating strategy tier images
Population summary
| Population | n | Mean %Parent | Range | CV | MFI: DAPI-A | Median: DAPI-A |
|---|---|---|---|---|---|---|
| Illustrative cells gate | 3 | 83.16% | 83.12-83.18% | 0.00 | ... | ... |
| Illustrative CD3+ gate | 3 | 80.26% | 80.14-80.43% | 0.00 | ... | ... |
Group comparison
| Population | Group | n | Mean %Parent | Range | Δ groups | MFI: DAPI-A | Median: DAPI-A |
|---|---|---|---|---|---|---|---|
| Illustrative CD3+ gate | Control | 1 | 80.14% | 80.14-80.14% | 0.00 | ... | ... |
| Illustrative CD3+ gate | Treated | 2 | 80.32% | 80.20-80.43% | 0.00 | ... | ... |
| Illustrative cells gate | Control | 1 | 83.18% | 83.18-83.18% | 0.00 | ... | ... |
| Illustrative cells gate | Treated | 2 | 83.15% | 83.12-83.18% | 0.00 | ... | ... |
Control comparison
Illustrative CD3+ gate
+0.18%
Treated vs Control · 1.00x · d=n/a · p=n/a
Illustrative cells gate
-0.02%
Treated vs Control · 1.00x · d=n/a · p=n/a
| Population | Comparison | Control mean | Compare mean | Δ % Parent | SEM | Cohen's d | p / q | Fold | n |
|---|---|---|---|---|---|---|---|---|---|
| Illustrative CD3+ gate | Treated vs Control | 80.14% | 80.32% | +0.18% | 0.00% / 0.11% | - | - | 1.00x | 1/2 |
| Illustrative cells gate | Treated vs Control | 83.18% | 83.15% | -0.02% | 0.00% / 0.03% | - | - | 1.00x | 1/2 |
Group detail tiles
Control
1 sample · 180,000 events · 2 populations
Expand detail tiles
Representative layoutPopulation hierarchyPopulation summaryControl comparisonQC and provenance
Representative layout
Demo cohort 1.fcs
Layout plots were skipped because this sample is not currently loaded in memory.
Population summary
PopulationnMean %ParentRangeCV
Illustrative cells gate
1
83.18%
83.18-83.18%
0.00
Illustrative CD3+ gate
1
80.14%
80.14-80.14%
0.00
Treated
2 samples · 360,000 events · 2 populations
Expand detail tiles
Representative layoutPopulation hierarchyPopulation summaryControl comparisonQC and provenance
Representative layout
Demo cohort 2.fcs
Layout plots were skipped because this sample is not currently loaded in memory.
Population summary
PopulationnMean %ParentRangeCV
Illustrative cells gate
2
83.15%
83.12-83.18%
0.00
Illustrative CD3+ gate
2
80.32%
80.20-80.43%
0.00
QC status
| Sample | QC | Review |
|---|---|---|
| Demo cohort 1.fcs | not run | reported |
| Demo cohort 2.fcs | not run | reported |
| Demo cohort 3.fcs | not run | reported |
Figure notes
Capture methods, caveats, or audit notes for the appendix.
Sample details
| Sample | Group | Population | Type | Events | % Parent | % Total | MFI: DAPI-A | Median: DAPI-A |
|---|---|---|---|---|---|---|---|---|
| Demo cohort 1.fcs | Control | All Events | root | 180,000 | 100.00% | 100.00% | ... | ... |
| Demo cohort 1.fcs | Control | Illustrative cells gate | rectangle | 149,722 | 83.18% | 83.18% | ... | ... |
| Demo cohort 1.fcs | Control | Illustrative CD3+ gate | rectangle | 119,980 | 80.14% | 66.66% | ... | ... |
| Demo cohort 2.fcs | Treated | All Events | root | 180,000 | 100.00% | 100.00% | ... | ... |
| Demo cohort 2.fcs | Treated | Illustrative cells gate | rectangle | 149,732 | 83.18% | 83.18% | ... | ... |
| Demo cohort 2.fcs | Treated | Illustrative CD3+ gate | rectangle | 120,086 | 80.20% | 66.71% | ... | ... |
| Demo cohort 3.fcs | Treated | All Events | root | 180,000 | 100.00% | 100.00% | ... | ... |
| Demo cohort 3.fcs | Treated | Illustrative cells gate | rectangle | 149,624 | 83.12% | 83.12% | ... | ... |
| Demo cohort 3.fcs | Treated | Illustrative CD3+ gate | rectangle | 120,342 | 80.43% | 66.86% | ... | ... |
Metadata and workflow audit
Metadata
- Demo cohort 1.fcsgroup: - · condition: Control · timepoint: - · replicate: -
- Demo cohort 2.fcsgroup: - · condition: Treated · timepoint: - · replicate: -
- Demo cohort 3.fcsgroup: - · condition: Treated · timepoint: - · replicate: -
Recent workflow steps
- No workflow steps recorded.